1. “Compaction and clustering of a heterogeneous polymer by biomolecular crowding” A. Sadeghi, C. Hyeon, Y. Jung, B.-Y. Ha, J. Chem. Phys. (2024) 161, 184904.
  2. "Anomalous Water Penetration in Al3+ Dissolution" M. Kim, S. Kim, C. Hyeon, J. W. Yu, S. Q. Choi, W. B. Lee J. Phys. Chem. Lett. (2024) 15, 10903
  3. "Introduction to new views of allostery" Q. Cui, P. Hamm, G. Haran, C. Hyeon J. Chem. Phys. (2024) 161, 150401
  4. "Hi-C guided many-polymer model to decipher 3D genome organization" C. Shi, L. Liu, C. Hyeon. Biophys. J. (2024) 123, 2574-2583
  5. "Unveiling the odor representation in the inner brain of Drosophila through compressed sensing" K. Choi, W. K. Kim, C. Hyeon, Phys. Rev. Research (2024) 6, 023298 SI
  6. "Kinetic model for the desensitization of G protein-coupled receptor" W. K. Kim, S. Jang, C. Hyeon, J. Phys. Chem. Lett. (2024) 15, 6137-6145 SI
  7. "Water hydrogen-bond mediated layer by layer alignment of lipid rafts as a precursor of intermembrane processes” S. Lee, J. H. Bak, Y. Lee, D.-W. Jeong, J. Lee, K. M. Lee, H. Cho, H. H. Lee, C. Hyeon, M. C. Choi, J. Am. Chem. Soc. (2024) 146, 13846-13853   SI
  8. "Glycolytic oscillations under periodic drivings" P. Kim, C. Hyeon, J. Roy. Soc. Interface (2024) 21, 20230588
  9. "General chemical reaction network theory for olfactory sensing based on G-protein coupled receptors: Elucidation of odorant mixture effects and agonist-synerist threshold" W. K. Kim, K. Choi, C. Hyeon, S. Jang, J. Phys. Chem. Lett. (2023) 14, 8412-8420
  10. "Irregularity of polymer domain boundaries in two-dimensional polymer solution" L. Liu, C. Hyeon, Macromolecules (2023) 56, 6870-6879 .
  11. "Fundamental trade-off between the speed of light and the Fano factor of photon current in three-level lambda systems" D. Singh, S. J. Jang, C. Hyeon, J. Phys. A: Math. Theor. (2023) 56, 015001  
  12. "TMAO Destabilizes RNA Secondary Structure via Direct Hydrogen Bond Interactions" S. S. Cho, A. Green, C. Hyeon, D. Thirumalai, J. Phys. Chem. B. (2023) 127, 438-445
  13. "Polymer Physics-based Classification of Neurons" K. Choi, W. K. Kim, C. Hyeon, Neuroinformatics (2023) 21, 177-193
  14. "Solvent quality dependent osmotic pressure of polymer solutions in two dimensions" L. Liu, C. Hyeon, J. Phys. Chem. B (2022) 126, 9695-9704 .
  15. "Moderate activity of RNA chaperone maximizes the yield of self-spliced pre-RNA in vivo" Y. Song, D. Thirumalai, C. Hyeon, Proc. Natl. Acad. Sci. USA (2022) 119, e2209422119 SI
  16. "Olfactory responses of Drosophila are encoded in the organization of projection neurons" K. Choi, W. K. Kim, C. Hyeon, eLife (2022) 11:e77748
  17. "Dissecting the co-segregation probability from genome architecture mapping" L. Liu, X. Cao, B. Zhang, C. Hyeon, Biophys. J. (2022) 121, 3774-3784
  18. "Location of the TEMPO moiety of TEMPO-PC in phosphatidylcholine bilayers is membrane phase-dependent" S. Kim, C. Hyeon, Biophys. J. (2022) 121, 2550-2556
  19. “Extracting multi-way chromatin contacts from Hi-C data” L. Liu, B. Zhang, C. Hyeon, PLoS Comp. Biol. (2021) 17, e1009669
  20. “Origin of loose bound of the thermodynamic uncertainty relation in a dissipative two-level quantum system” D. Singh, C. Hyeon, Phys. Rev. E. (2021) 104, 054115
  21. "Cost-precision trade-off relation determines the optimal morphogen gradient for accurate biological pattern formation" Y. Song, C. Hyeon, eLife (2021) 10:e70034
  22. "Polymer brush-induced depletion interactions and clustering of membrane proteins" A. M. Tom, W. K. Kim, C. Hyeon, J. Chem. Phys. (2021) 154, 214901.  
  23. "Thermodynamic optimality of glycolytic oscillations" P. Kim, C. Hyeon, J. Phys. Chem. B. (2021) 125, 5740-5749 SI
  24. “Extreme parsimony in ATP consumption by 20S complexes in the global disassembly of single SNARE complexes” C. Kim, M. J. Shon, S. H. Kim, G. S. Eun, J.-K. Ryu, C. Hyeon, R. Jahn, T. Y. Yoon, Nat. Commun. (2021) 12, 3206.
  25. "Thermodynamic uncertainty relation to assess biological processes" Y. Song, C. Hyeon, J. Chem. Phys. (2021) 154, 130901  
  26. “A unified framework for inferring the multi-scale organization of chromatin domains from Hi-C” J. H. Bak, M. H. Kim, L. Liu, C. Hyeon, PLoS Comp. Biol. (2021) 17(3): e1008834 SI
  27. "Revisiting the organization of Polycomb-repressed domains: 3D chromatin models from Hi-C compared with super-resolution imaging" L. Liu, C. Hyeon, Nucl. Acids Res. (2020) 48, 11486-11494
  28. "Thermodynamic cost of synchronizing a population of beating cilia" H. Hong, J. Jo, C. Hyeon, H. Park. J. Stat. Mech. (2020) 074001
  29. "Water-mediated biomolecular dynamics and allostery" D. M. Leitner, C. Hyeon, K. M. Reid, J. Chem. Phys. (2020) 152, 240901.
  30. "Thermodynamic cost, speed, fluctuations, and error reduction of biological copy machines" Y. Song, C. Hyeon, J. Phys. Chem. Lett. (2020) 11, 3136-3143.
    , SI
  31. “Near-Θ polymers in a cylindrical space” Y. Jung, C. Hyeon, B.-Y. Ha, Macromolecules (2020) 53, 2412-2419
  32. “Theoretical Perspectives on Biological Machines” M. L. Mugnai, C. Hyeon, M. Hinczewski, D. Thirumalai,  Rev. Mod. Phys. (2020) 92, 025001
  33. "Iterative Annealing Mechanism Explains the Functions of the bacterial chaperonin GroEL and RNA Chaperones" D. Thirumalai, G. H. Lorimer, C. Hyeon, Protein Sci. (2020) 29, 360-377
  34. “Increased Confinement and Polydispersity of STIM1 and Orai1 after Ca2+ Store Depletion” X. Qin , L. Liu, S. K. Lee, A. Alsina, T. Liu, C. Wu, H. Park, C. Yu, H. Kim, J. Chu, A. Triller, B. Z. Tang, C. Hyeon, C. Y. Park, H. Park, Biophys. J. (2020) 118, 70-84
  35. “Compressing Θ-chain in slit geometry” L. Liu, P. A. Pincus, C. Hyeon, Nano Letters (2019) 19, 5667-5673 SI
  36. “Heterogeneous loop model to infer 3D chromosome structures from Hi-C” L. Liu, M. H. Kim, C. Hyeon, Biophys. J. (2019) 117, 613-625
  37. “Symmetry, Rigidity, and Allosteric Signaling: From Monomeric Proteins to Molecular Machines” D. Thirumalai, C. Hyeon, P. I. Zhuravlev, G. H. Lorimer, Chem. Rev. (2019) 119, 6788-6821.
  38. "Chain organization of human interphase chromosome determines the spatiotemporal dynamics of chromatin loci" L. Liu, G. Shi, D. Thirumalai, C. Hyeon, PLoS Comp. Biol. (2018) 14:e1006617 SI
  39. "Dynamic Coordination of Two-Metal-Ions Orchestrates λ-Exonuclease catalysis" W. Hwang, Y. Yoo, Y. Lee, S. Park, P. L. Hoang, H. Cho, J. Yu, T. M. H. Vo, M. Shin, M. S. Jin, D. Park, C. Hyeon, G. Lee. Nat. Commun. (2018) 9:4404 Access the recommendation on F1000Prime
  40. “Thermodynamic uncertainty relation of interacting oscillators in synchrony” S. Lee, C. Hyeon, J. Jo Phys. Rev. E. (2018) 98, 032119
  41. "Interphase human chromosome exhibits out of equilibrium glassy dynamics" G. Shi, L. Liu, C. Hyeon, D. Thirumalai Nat. Commun. (2018) 9:3161
  42. "Oligomer Formation Propensities of Dimeric Bundle Peptides Correlate with Cell Penetration Abilities" S. Hyun, Y. Lee, S. M. Jin, J. Cho, J. Park, C. Hyeon, K.-S. Kim, Y. Lee, J. Yu ACS Central Science (2018) 4, 885-893
  43. "Implications for human odor sensing revealed from the statistics of odorant-receptor interactions" J. H. Bak, S. J. Jang, C. Hyeon, PLoS Comp. Biol. (2018) 14, e1006175. ,
  44. "From Octopus to Dendrite - Semiflexible Polyelectrolyte Brush Condensates in Trivalent Counterion Solution" L. Liu, C. Hyeon, J. Chem. Phys. (2018) 149, 163302. 
  45. "Time-evolving genetic networks reveal a NAC troika that negatively regulates leaf senescence in Arabidopsis" H. J. Kim, J.-H. Park, J. Kim, J. J. Kim, S. Hong, J. Kim, J. H. Kim, H. R. Woo, C. Hyeon, P. O. Lim, H. G. Nam, D. Hwang, Proc. Natl. Acad. Sci. USA  (2018) 115, E4930-E4939
  46. “Signaling Networks and Dynamics of Allosteric Transition in Bacterial Chaperonin GroEL: Implications for Iterative Annealing Misfolded Proteins” D. Thirumalai, C. Hyeon Philos. Trans. Royal Soc. B - Biological Sciences (2018) 373, 20170182.
  47. "Energetic Costs, Precision, and Transport Efficiency of Molecular Motors" W. Hwang, C. Hyeon, J. Phys. Chem. Lett. (2018) 9, 513-520 , SI 
  48. "Molecular chaperones maximize the native state yield on biological times by driving substrates out of equilibrium" S. Chakrabarti, C. Hyeon, X. Ye, G. H. Lorimer, D. Thirumalai, Proc. Natl. Acad. Sci. U. S. A. (2017) 114, E10919-E10927
  49. "Ultrasensitivity of water exchange kinetics to the size of metal ion" Y. Lee, D. Thirumalai, C. Hyeon. J. Am. Chem. Soc. (Communication) (2017) 139, 12334-12337. , SI
  50. "Physical insight into the thermodynamic uncertainty relation using Brownian motion in tilted periodic potentials" C. Hyeon, W. Hwang, Phys. Rev. E. (2017) 96, 012156
  51. "Heterogeneity in kinesin function" B. J. N Reddy, S. Tripathy, M. Vershinin, M. Tanenbaum, J. Xu, M. Mattson-Hoss, K. Arabi, D. Chapman, T. Doolin, C. Hyeon, S. P. Gross Traffic (2017) 18, 658-671
  52. "Heterogeneous morphology and dynamics of polyelectrolyte brush condensates in trivalent counterion solution" L. Liu, P. A. Pincus, C. Hyeon, Macromolecules (2017) 50, 1579-1588 . 
  53. "Kinetic Model for the Activation of Mammalian Olfactory Receptor" S. Jang, C. Hyeon, J. Phys. Chem. B (2017) 121, 1304-1311 .
  54. "Quantifying the Heat Dissipation from a Molecular Motor's Transport Properties in Nonequilibrium Steady States" W. Hwang, C. Hyeon J. Phys. Chem. Lett. (2017) vol. 8, 250-256 , SI
  55. "Ripping RNA by Force using Gaussian Network Models" C. Hyeon, D. Thirumalai J. Phys. Chem. B (2017) vol. 121, 3515-3522 .
  56. "Decoding Single Molecule Time Traces with Dynamic Disorder" W. Hwang, I. -B. Lee, S. -C. Hong, C. Hyeon PLoS Comp. Biol. (2016) 12(12), e1005286
  57. "Effects of dimethyl sulfoxide on surface water near phospholipid bilayers" Y. Lee, P. A. Pincus, C. Hyeon Biophys. J. (2016) vol. 111, 2481-2491 (Cover Article)   Featured in Biophysical Society Blog
  58. "How are molecular crowding and the spatial organization of a biopolymer interrelated" C. Jeon, C. Hyeon, Y. Jung, B.-Y. Ha Soft Matter (2016) vol. 12, 9786-9796
  59. "Ultraslow water-mediated transmembrane interactions regulate the activation of A2A adenosine receptor" Y. Lee, S. Kim, S. Choi, C. Hyeon Biophys. J. (2016) vol. 111, 1180-1191 , SI Movie 1 Movie 2 Movie 3 Movie 4
  60. "Directly measuring single-molecule heterogeneity using force spectroscopy" M. Hinczewski, C. Hyeon, D. Thirumalai Proc. Natl. Acad. Sci. USA (2016) vo. 113, E3852-E3861 
  61. "Contact statistics highlight distinct organizing principles of RNA and proteins" L. Liu & C. Hyeon Biophys. J. (2016) vol. 110, 2320-2327  , SI , New and Notable Access the recommendation on F1000Prime
  62. “Confinement-induced glassy dynamics in a model for chromosome organization” H. Kang, Y.-G. Yoon, D. Thirumalai, C. Hyeon Phys. Rev. Lett. (2015) vol. 115, 198102 SM
  63. "Unexpected swelling of stiff DNA in a polydisperse crowded environment" H. Kang, N. M. Toan, C. Hyeon, D. Thirumalai J. Am. Chem. Soc. (2015) vol. 137, 10970-10978
  64. "Deciphering kinetic information from single molecule FRET data that show slow transitions" S. E. Kim, I. -B. Lee, C. Hyeon, S.-C. Hong J. Phys. Chem. B. (2015) vol. 119, 6974–6978
  65. "Spring-loaded unraveling of a single SNARE complex by NSF in one round of ATP turnover" J.-K. Ryu, D. Min, S.-H. Rah, S. J. Kim, Y. Park, H. Kim, C. Hyeon, H. M. Kim, R. Jahn, T.-Y. Yoon Science (2015) vol. 347, 1485-1489 , SI
  66. "Effects of macromolecular crowding on the collapse of biopolymers" H. Kang, P. A. Pincus, C. Hyeon, D. Thirumalai Phys. Rev. Lett. (2015) vol. 114, 068303  , SI
  67. “Using Simulations and kinetic network models to reveal the dynamics and functions of riboswitches” J.-C. Lin, J. Yoon, C. Hyeon, D. Thirumalai, Methods in Enzymology (2015) 553, 235-258
  68. "Communication over the network of binary switches regulates the activation of A2A adenosine receptor" Y. Lee, S. Choi, C. Hyeon PLoS Comp. Biol. (2015) 11(2): e1004044. , SI , movie M1 .
  69. "Programmed folding of DNA origami structures through single-molecule force control" W. Bae , K. Kim, D. Min, J.-K. Ryu, C. Hyeon, T.-Y. Yoon Nat. Commun (2014) vol. 5, 5654 SI
  70. "Dynamical Transition and Heterogeneous Hydration Dynamics in RNA" J. Yoon, J.-C. Lin, C. Hyeon, D. Thirumalai J. Phys. Chem. B. (2014) vol. 118, 7910-7919
  71. "Destabilization of i-motif by submolar concentrations of a monovalent cation" S. Kim, I.-B. Lee, C. Hyeon, S.-C. Hong J. Phys. Chem. B. (2014) vol. 118, 4753-4760.
  72. "Evidence of disorder in biological molecules from single molecule pulling experiments" C. Hyeon, M. Hinczewski, D. Thirumalai Phys. Rev. Lett. (2014) vol. 112, 138101 SI
  73. "Development and applications of Coarse Grained models for RNA" C. Hyeon, N. A. Denesyuk, D. Thirumalai Israel J. Chem. (2014) vol. 54, 1358-1373
  74. “Sequence-dependent folding landscapes of adenine riboswitch aptamers” J.-C. Lin, C. Hyeon, D. Thirumalai Phys. Chem. Chem. Phys. (2014) vol. 16, 6376
  75. "Mapping the intramolecular signal transduction of G-protein coupled receptors" Y. Lee, S. Choi, & C. Hyeon Proteins: Struct. Func. Bioinfo. (2014) vol. 82, 727-743  SI-I , SI-II
  76. "Generalized Iterative Annealing Model for the action of RNA chaperones" C. Hyeon & D. Thirumalai J. Chem. Phys. (2013) vol. 139, 121924  
  77. "Urea-induced denaturation of preQ1-riboswitch" J. Yoon, D. Thirumalai, C. Hyeon J. Am. Chem. Soc. (2013) vol. 135, 12112-12121 SI Movie 1 , Movie 2 , Movie 3 , Movie 4 , Movie 5 , Movie 5 (detailed) featured in JACS spotlights 
  78. "Real-Time Observation of Multiple Protein-Complex Formation with Single-Molecule FRET " W. Bae, M.-G. Choi, C. Hyeon, Y.-K. Shin, T.-Y. Yoon J. Am. Chem. Soc. (Communication) (2013) vol. 135, 10254-10257 SI
  79. "Mechanical unzipping and rezipping of a single SNARE complex reveals hysteresis as a force-generating mechanism" D. Min, K. Kim, C. Hyeon, Y. H. Cho, Y.-K. Shin, T.-Y. Yoon Nat. Commun. (2013) vol. 4, 1705 SI
  80. "Real-time single-molecule co-immunoprecipitation analyses reveal cancer-specific Ras signaling dynamics" H.-W. Lee, T. Kyung, J. Yoo, T. Kim, C. Chung, J.Y. Ryu, H. Lee, K. Park, S. Lee, W.D. Jones, D.-S. Lim, C. Hyeon, W.D. Heo, T.-Y. Yoon Nat. Commun. (2013) vol. 4, 1505 SI
  81. "RNA under Tension: Folding Landscapes, Kinetic Partitioning Mechanism, and Molecular Tensegrity" J.-C. Lin, C. Hyeon, D. Thirumalai J. Phys. Chem. Lett. (2012) vol. 3, 3616-3625
  82. "The origin of minus-end directionality and mechanochemistry of Ncd motors" B. Jana, C. Hyeon, J. N. Onuchic PLoS Comp. Biol. (2012) 8(11): e1002783   
  83. "Hidden Complexity in the Isomerization Dynamics of Holliday Junctions" C. Hyeon, J. Lee, J. Yoon, S. Hohng, D. Thirumalai Nature Chemistry (2012) vol. 4, 907-914 SI
  84. "Weak temporal signals can synchronize and accelerate the transition dynamics of biopolymers under tension" W. K. Kim,  C. Hyeon & W. Sung Proc. Natl. Acad. Sci. USA. (2012) vol. 109, 14410-14415
  85. "Multiple barriers in forced rupture of protein complexes" C. Hyeon & D. Thirumalai J. Chem. Phys. (2012) vol. 137, 055103
  86. "Efficient Functional Delivery of siRNA using Mesoporous Silica Nanoparticles with Ultralarge Pores" H.-K. Na, M.-H. Kim, K. Park, S.-R. Ryoo, K.E. Lee, H. Jeon, R. Ryoo, C. Hyeon, D.-H. Min, Small (2012) vol. 8, 1752-1761 , SI
  87. "Force-induced Unbinding Dynamics in a Multidimensional Free Energy Landscape" C. Hyeon Bull. Korean Chem. Soc. - K. J. Shin Festshrift (2012) vol. 33, 897-900 http://arxiv.org/abs/1201.2449
  88. "Chain Length Determines the Folding Rates of RNA" C. Hyeon & D. Thirumalai Biophys. J. (2012) vol. 102, L11-L13 .
  89. "A structural perspective on the dynamics of kinesin motors" C. Hyeon & J. N. Onuchic Biophys. J. (2011) vol. 101, 2749 , SI
  90. "Link between Allosteric Signal Transduction and Functional Dynamics in a Multisubunit Enzyme: S-Adenosylhomocysteine Hydrolase" Y. Lee, L.S. Jeong, S. Choi, & C. Hyeon J. Am. Chem. Soc.  (2011) vol. 133, 19807-19815  ,  SI , Movie  ,  .
  91. "Capturing the essence of folding and functions of biomolecules using Coarse-Grained Models" C. Hyeon & D. Thirumalai Nat. Commun. (2011) vol 2, 487
  92. "Compaction and tensile forces determine the accuracy of folding landscape parameters from single molecule pulling experiments" G. Morrison, C. Hyeon, M. Hinczewski & D. Thirumalai Phys. Rev. Lett. (2011) vol. 106, 138102
  93. "Theoretical Perspectives on Protein Folding" D. Thirumalai, E. P. O'Brien, G. Morrison & C. Hyeon Annu. Rev. Biophys. (2010) vol. 39, 159-183
  94. "Dynamic Ca2+-Dependent Stimulation of Vesicle Fusion by Membrane-Anchored Synaptotagmin 1" H. -K. Lee, Y. Yang, Z. Su, C. Hyeon, T. -S. Lee, H. -W. Lee, D. -H. Kweon, Y. -K. Shin & T. -Y. Yoon Science (2010) vol. 328, 760-763 , SOM
  95. "Urea destabilizes RNA by forming stacking interactions and multiple hydrogen bonds with nucleic acid bases" U. D. Priyakumar, C. Hyeon, D. Thirumalai & A. D. MacKerell Jr. J. Am. Chem. Soc. (Communication) (2009) vol.131, 17759-17761 , Supporting Info   featured in C&EN news
  96. "Refolding dynamics of stretched biopolymers upon force-quench" C. Hyeon, G. Morrison, D. L. Pincus, & D. Thirumalai, Proc. Natl. Acad. Sci. USA. (2009) vol. 106, 20288-20293 , Supporting Info
  97. "Metal Ion Dependence of Cooperative Collapse Transitions in RNA" S. Moghaddam, G. Caliskan, S. Chauhan, C. Hyeon, R. M. Briber, D. Thirumalai & S. A. Woodson, J.  Mol. Biol. (2009) vol. 393, 753-764
  98. "Kinesin's Backsteps under Mechanical Load" C. Hyeon, S. Klumpp & J. N. Onuchic, Phys. Chem. Chem. Phys. (2009) vol. 11, 4899-4910
  99. "Ligand-induced global transition in the catalytic domain of protein kinase A" C. Hyeon, P. A. Jennings, J. A. Adams & J. N. Onuchic, Proc. Natl. Acad. Sci. USA. (2009) vol. 106, 3023-3028,  Supporting  info , Movie  .
  100. "Force dependent hopping rates of RNA hairpins can be estimated from accurate measurement of the folding landscapes" C. Hyeon, G. Morrison & D. Thirumalai, Proc. Natl. Acad. Sci. USA. (2008) vol. 105, 9604-9609 ,  Supporting  info.
  101. "Effects of Trimethylamine N-Oxide (TMAO) and Crowding Agents on the stability of RNA hairpins" D. L. Pincus, C. Hyeon & D. Thirumalai, J. Am. Chem. Soc. (2008) vol. 130, 7364-7372 ,  Supporting  info   featured in JACSβ
  102. "Kinetics of loop formation in polymer chains" N. M. Toan, G. Morrison, C. Hyeon & D. Thirumalai, J. Phys. Chem. B (2008) vol. 112, 6094-6106 
  103. "Multiple probes are required to explore and control the rugged energy landscape of RNA hairpins" C. Hyeon & D. Thirumalai, J. Am. Chem. Soc. (Communication) (2008) vol. 130, 1538-1539  Supporting Info. 
  104. "Revealing the bifurcation in the unfolding pathways of GFP using single molecule experiments and simulations" M. Michkler, R. I. Dima, H. Dietz, C. Hyeon, D. Thirumalai & M. Rief Proc. Natl. Acad. Sci. USA. (2007) vol. 104, 20268-20273 
  105. "Mechanical control of the directional stepping dynamics of the kinesin motor" C. Hyeon & J. N. Onuchic, Proc. Natl. Acad. Sci. USA. (2007) vol. 104, 17382-17387 , Supporting Info. 
  106. "Stretching Homopolymers" G. Morrison, C. Hyeon, N. M. Toan, B. -Y. Ha & D. Thirumalai, Macromolecules (2007) vol. 40, 7343-7353 
  107. "Charge density of divalent metal cations determines RNA stability" E. Koculi, C. Hyeon, D. Thirumalai, & S. A. Woodson, J. Am. Chem. Soc. (2007) vol. 129, 2676-2682 
  108. "Measuring the energy landscape roughness and the transition state location of biomolecules using single molecule mechanical unfolding experiments" C. Hyeon & D. Thirumalai, J. Phys.:Condens. Matter (2007) vol. 19, 113101 
  109. "Internal strain regulates the nucleotide binding site of the kinesin leading head" C. Hyeon & J. N. Onuchic, Proc. Natl. Acad. Sci. USA (2007) vol. 104, 2175-2180 , Supporting Info. , SI Fig.6 , SI Fig.7 , SI Fig.8 , SI Fig.9 
  110. "Mechanical unfolding of RNA: From hairpins to structures with internal multiloops" C. Hyeon & D. Thirumalai, Biophys. J. (2007) vol. 92, 731-743 
  111. "Dynamics of allosteric transitions in GroEL" C. Hyeon, G.H. Lorimer & D. Thirumalai, Proc. Natl. Acad. Sci. USA (2006) vol. 103, 18939-18944 ,      Supporting materials 
  112. "Size, Shape, and flexibility of RNA structures" C. Hyeon, R. I. Dima, & D. Thirumalai, J. Chem. Phys. (2006) vol. 125, 194905 
  113. "Pathways and kinetic barriers in mechanical unfolding and refolding of RNA and proteins" C. Hyeon, R.I. Dima, & D. Thirumalai, Structure (2006) vol. 14, 1633-1645 
  114. "Forced-Unfolding and Force-Quench Refolding of RNA Hairpins" C. Hyeon & D. Thirumalai, Biophys. J. (2006) vol. 90, 3410-3427 
  115. "Kinetics of interior loop formation in semiflexible chains" C. Hyeon & D. Thirumalai, J. Chem. Phys. (2006) vol. 124, 104905 
  116. "Persistence Length Changes Dramatically as RNA Folds" G. Caliskan, C. Hyeon, U. Perez-Salas, B.M. Briber, S.A. Woodson, & D. Thirumalai, Phys. Rev. Lett. (2005) vol. 95, 268303 
  117. "RNA and Protein Folding: Common Themes and Variations" D. Thirumalai & C. Hyeon, Biochemistry (2005) vol. 44, 4957-4970 
  118. "Extracting Stacking Interaction Parameters for RNA from the Data Set of Native Structures" R.I. Dima, C. Hyeon, and D. Thirumalai, J. Mol. Biol. (2005) vol. 347, 53-69 
  119. "Mechanical unfolding of RNA hairpins" C. Hyeon & D. Thirumalai, Proc. Natl. Acad. Sci. USA (2005) vol. 102, 6789-6794  
  120. "Can energy landscape roughness of proteins and RNA be measured using mechanical unfolding experiments?" C. Hyeon & D. Thirumalai, Proc. Natl. Acad. Sci. USA (2003) vol. 100, 10249-10253 
  121. "One-pot Template Synthesis and Properties of a Molecular Bowl: Dodecaaza Macrotetracycle with mu(3)-Oxo and mu(3)-Hydroxo Tricopper(II) Cores" M. Paik Suh, M.Y. Han, J.H.Lee K.S.Min, & C. Hyeon. J. Am. Chem. Soc. (Communication) (1998) vol. 120, 3819-3820 
  122. "Effects of a quantum-mechanically driven two-state gating mode on the diffusion-influenced bimolecular reactions" Y. Jung, C. Hyeon, S. Shin, & S. Lee, J. Chem. Phys. (1997) vol. 107, 9864  
    123.


Book Chapter
  1. "Minimal Models for the Structure and Dynamics of Nucleic Acids" C. Hyeon and D. Thirumalai, Chapter 5 in "Molecular Modeling at the Atomic Scale" edited by Ruhong Zhou (2014) CRC Press.
  2. "Exploring the energy landscape of biopolymers using single-molecule force spectroscopy and molecular simulations" C. Hyeon in Chapter 5 in "Simulations in Nanobiotechnology" edited by K. Eom (2011) Taylor & Francis
  3. "Energy balance and Dynamics of Kinesin Motors" C. Hyeon, & José N. Onuchic in Chapter 1 in "Proteins: Energy, Heat and Signal Flow" edited by D. M. Leitner and J. E. Straub (2009) CRC Press (Part of the book is scanned, available in google book. Follow this web link)
  4. D.L. Pincus, S.S. Cho, C. Hyeon, & D. Thirumalai, "Minimal Models for Protein and RNA: From Folding to Function", Chapter 6 in Progress in Molecular Biology and Translational Science edited by P. Michael Conn (2008) Academic Press, Vol. 84.
  5. "Theory of RNA Folding: From Hairpins to Ribozymes" D. Thirumalai & C. Hyeon, Chapter 2 in Non-Protein Coding RNAs edited by Nils G. Walter, Sarah A. Woodson, and Robert T. Batey (2008) Springer Series in Biophysics, Vol. 13 (Part of the book is scanned in google book. Follow this web link)
  6. "Coarse-Grained Structure-Based Simulations of Proteins and RNA" A. Schug, C. Hyeon, & J. N. Onuchic, Chapter 9 in Coarse-Graining of Condensed Phase and Biomolecular Systems edited by G. A. Voth (2008) CRC Press (Part of the book is scanned in google book. Follow this web link)

Commentary
  1. "Finding the condition of Turing instabilities" DOI: 10.36471/JCCM_January_2021_01


Essay
  1. "자전거 출퇴근" 고등과학원 26주년 기념 '자연과학주들의 수필집' 에 수록
  2. "에너지와 생명과 인간과 지구" HORIZON에 수록
  3. "아보가드로 수 - 물질세계의 불연속성에 대하여" HORIZON에 수록
  4. "책장을 정리하며" 고등과학원 20주년 기념 `자연과학자들의 수필집'에 수록 
  5. 생체고분자의 동역학 연구를 통한 생명의 이해 (지식의 지평 2014, 16호 수록)
  6. Phys. Rev. Lett. (2014) 112, 138101 소개 (Physics Plaza, 물리학과 첨단기술, 2014년 7/8월호 48쪽) 
  7. 전산모사를 이용한 생체분자모터 동역학의 이해 (물리학과 첨단기술, May 2011, 27-31)
  8. 열적 요동과 생물물리학 (고등과학원 소식지, "과학의 지평" no.43, 2010)
  9. 생물물리학의 방법론 (한국생물물리학회 Newsletter 제14권 1호 2009.05)

Contact Information : Changbong Hyeon, Professor, School of Computational Sciences, Korea Institute for Advanced Study, Seoul 02455, Korea
+82-2-958-3810 (tel)

© 2010 KIAS Theoretical and Computational Biophysics Group